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Case study 3: Canham function growth with tree data from Barro Colorado Island6 months ago
References
hmde 1.4.0Tess O'Brien canham.Rmd
Case study 1: Constant growth with SUSTAIN Trout data6 months ago
Overview | Load dependencies | Priors | Simulate data | Visualise data | SUSTAIN trout data | Transform data | Visualise raw data | Fit model using | Inspect estimates | $R^2$ | Individual growth functions ($\beta$) | Population hyper-parameters | References
hmde 1.4.0Tess O'Brien constant-growth.Rmd
Here be dragons6 months ago
Load dependencies | The model | Simulating data | Implementing models and collecting posterior estimates | Step size data | Analysis | Second cluster analysis | Where to from here?
hmde 1.4.0Tess O'Brien here_be_dragons.Rmd
hmde for Mathematicians6 months ago
Getting started with | The Theory | The Maths | The Stats | Integration of time series | Demonstration: Canham Growth - Multiple Individuals
hmde 1.4.0Tess O'Brien hmde_for_mathematicians.Rmd
Case study 2: von Bertalanffy growth with lizard size data6 months ago
Load dependencies | Overview | Priors | Visualise model | Lizard size data | Implementation | References
hmde 1.4.0Tess O'Brien von-bertalanffy.Rmd
hmde1 years ago
Installation | Overview | Notation | hmde supported growth functions | Workflow | References
hmde 1.4.0Tess O'Brien hmde.Rmd